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Transcriptome Toolset » exRNA Tools

  • Overview
  • Documents
  • Wiki
  • exceRpt Small RNA-seq
  • RSEQtools Long RNA-seq
  • Pathway and Interaction Analysis
  • DESeq2
  • Deconvolution
  • FAQ

Overview

This project contains tutorial materials for the extracellular RNA data analysis tools available on Genboree.

  • Introduction to Processing Your exRNA Samples Using the Genboree Workbench
  • Small RNA-Seq Data Analysis for exRNA Profiling Using the exceRpt Small RNA-seq Pipeline
    • Version Updates for exceRpt
    • Performing Data Analysis on Your Results from exceRpt
  • Long RNA-Seq Data Analysis Using RSEQtools
  • Detecting Circular and Linear Isoforms from RNA-seq Data Using KNIFE
  • Performing Pathway and Interaction Analysis Using the Genboree Workbench
  • Performing Differential Expression Analysis (Fold Change Calculation) with DESeq2
  • Performing Deconvolution Analysis for exRNA Data Using the Genboree Workbench
  • General FAQ for Transcriptome Toolset

Please contact the exRNA Team (brl-exrna@bcm.edu) for more information on these exRNA Data Analysis Tools.

Members

Administrator: Chen, David Kitchen, Rob LaPlante, Emily Pico, Alexander Rozowsky, Joel Subramanian, Sai Lakshmi Thistlethwaite, William

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