Overview

Introduction to the exRNA Atlas

Video Tutorial coming soon on all of the available features in the exRNA Atlas.

The exRNA Atlas contains data generated by the Extracellular RNA Communication (ERC) Consortium and uniformly analyzed using the exceRpt small RNA-seq pipeline.
There are two different versions of the exRNA Atlas:
  • a public version (accessible by everyone) and
  • a private version (accessible only by ERC Consortium members). The private version of the Atlas stores additional exRNA profiles that are not yet available to the public.
    You must log into your Genboree account in order to access the private version of the Atlas.
    If you are a member of the ERC Consortium and are unable to log in to the private atlas, please contact the Data Coordination Center () for assistance.

If you are interested in submitting data to the Atlas, visit the What Can I Do with exRNA Profiling Data page to learn more about the submission process.

Selecting Profiles

Using the ncRNA Search Bar

Faceted Charts

Viewing Selected Biosamples in Grid via Faceted Charts

Biosample Partition Grids

Viewing Biosamples in Biosample Partition Grid

Drill-down Sub-setting of Biosamples via Linear Tree

Viewing Selected Biosamples in Grid via Linear Tree

Downloading Profiles

Downloading Data from the exRNA Atlas

Downloading Data from the exRNA Atlas

Datasets

exRNA Profiling Datasets

Viewing exRNA Profiling Datasets

Summaries

Atlas Statistics

Viewing Atlas Statistics

Analysis Tools

Comparative and Downstream Analysis of Samples Using the Genboree Workbench

Comparative and Downstream Analysis of Samples Using the Genboree Workbench

Comparative and Downstream Analysis of Samples Using the exRNA Atlas

Comparative and Downstream Analysis of Samples Using the exRNA Atlas


Additional Features in Consortium-specific Atlas (ERCC-only)


Learn More About the exceRpt small RNA-seq Data Analysis Pipeline

exceRpt Homepage

Genboree Tutorial for Using exceRpt

Understanding Your exceRpt Results

exceRpt Version Updates

Also available in: HTML TXT