Overview

Introduction to the exRNA Atlas

The exRNA Atlas is the data repository of the Extracellular RNA Communication Consortium (ERCC), which includes small RNA sequencing and qPCR-derived exRNA profiles from human and mouse biofluids.
All RNA-seq datasets are processed using version 4 of the exceRpt small RNA-seq pipeline and ERCC-developed quality metrics are uniformly applied to these datasets.

There are two different versions of the exRNA Atlas:
  • a public version (accessible by everyone) and
  • a private version (accessible only by ERC Consortium members).
    • The private version of the Atlas stores additional exRNA profiles that are not yet available to the public.
    • You must log into your Genboree account in order to access the private version of the Atlas.
    • If you are a member of the ERC Consortium and are unable to log in to the private atlas, please contact the Data Coordination Center () for assistance.

If you are interested in submitting data to the Atlas, visit the Data & Metadata Processing Guide page to learn more about the submission process.

Selecting Profiles

Using the ncRNA Search Bar

Faceted Charts

Viewing Selected Biosamples in Grid via Faceted Charts

Biosample Partition Grids

Viewing Biosamples in Biosample Partition Grid

Drill-down Sub-setting of Biosamples via Linear Tree

Viewing Selected Biosamples in Grid via Linear Tree

Downloading Profile Data and Metadata from the exRNA Atlas

Downloading Data and Metadata from the exRNA Atlas

Viewing exRNA Profiling Datasets

Viewing exRNA Profiling Datasets

Viewing Atlas Statistics

Viewing Atlas Statistics

Running Analyses and Viewing Analysis Results Using the exRNA Atlas

Running Analyses and Viewing Analysis Results Using the exRNA Atlas


Learn More About the exceRpt small RNA-seq Data Analysis Pipeline

exceRpt Homepage

Genboree Tutorial for Using exceRpt

Understanding Your exceRpt Results

exceRpt Version Updates

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