Overview

Introduction to the exRNA Atlas

Watch Video Tutorial on all of the available features in the exRNA Atlas.

The exRNA Atlas contains data generated by the Extracellular RNA Communication (ERC) Consortium and uniformly analyzed using the exceRpt small RNA-seq pipeline.
There are two different versions of the exRNA Atlas:
  • a public version (accessible by everyone) and
  • a private version (accessible only by ERC Consortium members). The private version of the Atlas stores additional exRNA profiles that are not yet available to the public.
    You must log into your Genboree account in order to access the private version of the Atlas.
    If you are a member of the ERC Consortium and are unable to log in to the private atlas, please contact the Data Coordination Center () for assistance.

If you are interested in submitting data to the Atlas, visit the What Can I Do with exRNA Profiling Data page to learn more about the submission process.

Search Features

Faceted Search of Biosamples

Viewing Selected Biosamples in Grid via Faceted Search

Biosample Partition Grids

Viewing All Biosamples in Biosample Partition Grid

Drill-down Sub-setting of Biosamples via Linear Tree

Viewing Selected Biosamples in Grid via Linear Tree

Summaries

exRNA Profiling Studies

Viewing Summary Grid of exRNA Profiling Studies

Summary Bar Charts of exRNA Profiling Datasets

Viewing Summary Bar Charts of exRNA Profiling Datasets

Download Datasets from the exRNA Atlas

Downloading Datasets from the exRNA Atlas

Comparative and Downstream Analysis of Samples Using the Genboree Workbench

Comparative and Downstream Analysis of Samples Using the Genboree Workbench

Comparative and Downstream Analysis of Samples Using the exRNA Atlas

Comparative and Downstream Analysis of Samples Using the exRNA Atlas


Additional Features in Consortium-specific Atlas (ERCC-only)

DCC Tool Usage Summary

Viewing Summary Grid of DCC Submissions

Drill-down Sub-setting of Biosamples via Sunburst Diagram

Viewing Selected Biosamples in Grid via Sunburst Diagram


Learn More About the exceRpt small RNA-seq Data Analysis Pipeline

Tutorial

Understanding exceRpt Results

Tool Version Updates

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