FAQ#500 Version3
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What type of input files can be used for running the smallRNA pipeline?
| Category: | smallRNA Pipeline | Difficluty: |  |
| Assigned to: | - | Due date: | |
| Related issue: | - | Related Message: | - |
| Related version: | - | Valid: | Valid |
Answer
This pipeline takes a one or more single end FASTQ or "SRA" input file(s).
The input file(s) can be compressed.
The SRA file will be converted to FASTQ by the pipeline for further processing.
A maximum of 20 input FASTQ/SRA files can be compressed together in a single archive.
You can upload multiple archives to the Genboree Workbench to launch a single job.