FAQ#476 Version1

Version 1/1 - Current version

How do I create a new Genboree Database?

Updated by Riehle, Kevin about 11 years ago.

Category: Getting Started with Genboree Difficluty: Difficluty2
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Related version:- Valid:Valid

Answer

  1. Go to http://www.genboree.org
  2. Log in if necessary
  3. Click on the 'Workbench' tab or directly visit the Workbench http://genboree.org/java-bin/workbench.jsp
  4. Drag your Genboree Group to the Output Targets window. The Genboree Database will be created within this Genboree Group. Also see, How to Create a Genboree Group
  5. Click 'Data' -> 'Databases' -> 'Create Database'
  6. Select your Reference Sequence (i.e. 'Template: Human (hg19)'). NOTE: If you are using the Genboree Workbench for Metagenome analysis, plan to upload your reference sequence, or do not know your reference sequence please select '** User Will Upload **' (default).
  7. Enter Database Name and optional Description.
  8. Click 'Submit'
  9. Click Refresh and expand your Genboree Group -> Databases to see your newly created Genboree Database in the Data Selector window

Go to the Genboree Workbench

Drag the Genboree Group to Output Targets

Click Data -> Databases -> Create Database

The default Genboree Database will be empty

Select the appropriate Reference Sequence (i.e. Human hg19) if applicable

Enter Database Name and optional Description

Click OK after you have created your Genboree Database

Click Refresh and expand your Genboree Group -> Databases to see your newly created Genboree Database

See details of your Genboree Database in the Details window