FAQ#443 Version2

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How do I use the grid to create a List of Tracks? Assay Type vs Sample Type

Updated by Riehle, Kevin over 12 years ago.

Category: Using the Grid Viewer Difficluty: Difficluty6
Assigned to:- Due date:
Related issue:- Related Message:-
Related version:- Valid:Valid

Answer

  1. Go to http://www.genboree.org
  2. Log in if necessary
  3. Click on the 'Workbench' tab or directly visit the Workbench http://genboree.org/java-bin/workbench.jsp
  4. Expand the Group that contains your Database of interest
  5. Expand 'Databases'
  6. Drag your Database into the 'Input Data' window
  7. Click the 'Visualizations' tab and then 'Grid Viewer'
  8. Select your 'X-axis attribute' - 'eaAssayType'
  9. Select your 'Y-axis attribute' - 'eaSampleType'
  10. Click 'Submit'
  11. Click the link titled 'Launch Grid Viewer'
  12. Select your desired samples by single clicking individual cells or dragging your cursor over the cells
  13. Click the 'Save Selections' tab
  14. Select the Group in which your Database exists in which you would like to output this Track List
  15. Select your Database in which you would like to output this Track List
  16. Enter an informative name into the text box to label this group of tracks
  17. Click 'Save Selections'