#property value value value value domain Biosample EXR-JSAUG1UH2001-BS EXR-JSAUG1UH2002-BS EXR-JSAUG1UH2003-BS EXR-JSAUG1UH2004-BS autoID(EXR, uniqAlphaNum, BS) - Status Protect Protect Protect Protect enum(Add, Modify, Hold, Cancel, Suppress, Release, Protect, Validate) - Name Alzheimer's Disease CSF001 Alzheimer's Disease CSF002 Alzheimer's Disease CSF003 Alzheimer's Disease CSF004 string - Donor ID EXR-JSAUG1UH2001-DO EXR-JSAUG1UH2002-DO EXR-JSAUG1UH2003-DO EXR-JSAUG1UH2004-DO regexp(EXR-[a-zA-Z0-9]{6,}-DO) -- DocURL /coll/Donors/doc/EXR-JSAUG1UH2001-DO /coll/Donors/doc/EXR-JSAUG1UH2002-DO /coll/Donors/doc/EXR-JSAUG1UH2003-DO /coll/Donors/doc/EXR-JSAUG1UH2004-DO url -- Age at Sampling 71 y 71 y 77 y 77 y measurement(years) - Biological Sample Elements [valueless] -- Species [valueless] --- Scientific Name Homo sapiens Homo sapiens Homo sapiens Homo sapiens bioportalTerm(http://data.bioontology.org/search?ontology=NCBITAXON&subtree_root=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FNCBITAXON%2F40674) --- Common Name Human Human Human Human enum(Human, Mouse, Rat) --- Taxon ID 9606 9606 9606 9606 posInt -- Disease Type Alzheimer's Disease Alzheimer's Disease Alzheimer's Disease Alzheimer's Disease bioportalTerms((DOID,http://purl.obolibrary.org/obo/DOID_4),(NCIT,http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C7057),(NCIT,http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C94342)) -- Anatomical Location Structure of nervous tissue Structure of nervous tissue Structure of nervous tissue Structure of nervous tissue bioportalTerms((SNOMEDCT,http://purl.bioontology.org/ontology/SNOMEDCT/91689009),(SNOMEDCT,http://purl.bioontology.org/ontology/SNOMEDCT/272524002),(SNOMEDCT,http://purl.bioontology.org/ontology/SNOMEDCT/410652009)) -- Biological Fluid [valueless] --- Biofluid Name Cerebrospinal fluid Cerebrospinal fluid Cerebrospinal fluid Cerebrospinal fluid bioportalTerms((SNOMEDCT,http://purl.bioontology.org/ontology/SNOMEDCT/91720002),(MESH,http://purl.bioontology.org/ontology/MESH/D017077)) --- Collection Details [valueless] ---- Sample Collection Method Lumbar puncture Lumbar puncture Lumbar puncture Lumbar puncture bioportalTerm(http://data.bioontology.org/search?ontology=SNOMEDCT&subtree_root=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FSNOMEDCT%2F71388002) ---- Collection Tube Type Other Other Other Other enum(Red top tube (no additive), EDTA tube, Citrate tube, SST, Li-Heparin GST, Other) ----- Other Collection Tube Type polypropylene polypropylene polypropylene polypropylene string ---- Holding Temperature -80 C -80 C -80 C -80 C measurement(C) ---- Preservatives Used None None None None string ---- Freezing Method immediately frozen on dry ice until completely frozen, then transferred directly into -80 freezer immediately frozen on dry ice until completely frozen, then transferred directly into -80 freezer immediately frozen on dry ice until completely frozen, then transferred directly into -80 freezer immediately frozen on dry ice until completely frozen, then transferred directly into -80 freezer string ---- Number of Times Freeze Thawed 0 0 0 0 int ---- Contamination Removal Method first 5 cc's of fluid draw are discarded to eliminate blood or lidocaine. Otherwise no other method used in laboratory or otherwise first 5 cc's of fluid draw are discarded to eliminate blood or lidocaine. Otherwise no other method used in laboratory or otherwise first 5 cc's of fluid draw are discarded to eliminate blood or lidocaine. Otherwise no other method used in laboratory or otherwise first 5 cc's of fluid draw are discarded to eliminate blood or lidocaine. Otherwise no other method used in laboratory or otherwise string --- Notes Time of Collection: AM Time of Collection: AM Time of Collection: AM Time of Collection: AM string -- Starting Amount 0.5 ml 0.5 ml 0.5 ml 0.5 ml string -- Provider Oregon Alzheimer's Disease Center Oregon Alzheimer's Disease Center Oregon Alzheimer's Disease Center Oregon Alzheimer's Disease Center string --- Lab Name Biomarker Core Biomarker Core Biomarker Core Biomarker Core string --- Person Name Joseph Quinn, MD Joseph Quinn, MD Joseph Quinn, MD Joseph Quinn, MD string -- Notes Diagnosis at Sampling: AD Diagnosis at Sampling: AD Diagnosis at Sampling: AD Diagnosis at Sampling: AD string - Molecular Sample Elements [valueless] -- exRNA Source Total cell-free biofluid RNA Total cell-free biofluid RNA Total cell-free biofluid RNA Total cell-free biofluid RNA string -- Fractionation No No No No enum(Yes, No) -- Notes Samples were thawed and total RNA isolated using the mirVana Paris Kit protocol for Liquid Samples (RNA only), without enrichment for small RNA. Isolated RNA from each sample was concentrated using RNA Clean & Concentrator-5 Kit (Zymo Research), a spin column based concentration method, with elution in RNase/DNase free water. Samples were thawed and total RNA isolated using the mirVana Paris Kit protocol for Liquid Samples (RNA only), without enrichment for small RNA. Isolated RNA from each sample was concentrated using RNA Clean & Concentrator-5 Kit (Zymo Research), a spin column based concentration method, with elution in RNase/DNase free water. Samples were thawed and total RNA isolated using the mirVana Paris Kit protocol for Liquid Samples (RNA only), without enrichment for small RNA. Isolated RNA from each sample was concentrated using RNA Clean & Concentrator-5 Kit (Zymo Research), a spin column based concentration method, with elution in RNase/DNase free water. Samples were thawed and total RNA isolated using the mirVana Paris Kit protocol for Liquid Samples (RNA only), without enrichment for small RNA. Isolated RNA from each sample was concentrated using RNA Clean & Concentrator-5 Kit (Zymo Research), a spin column based concentration method, with elution in RNase/DNase free water. string * Custom Metadata numItems *- Property Name MMSE MMSE MMSE MMSE string *-- Value 17 20 18 12 string * Related Experiments numItems *- Related Experiment EXR-JSAUG1UH2001-EX EXR-JSAUG1UH2001-EX EXR-JSAUG1UH2001-EX EXR-JSAUG1UH2001-EX regexp(EXR-[a-zA-Z0-9]{6,}-EX) *-- DocURL /coll/Experiments/doc/EXR-JSAUG1UH2001-EX /coll/Experiments/doc/EXR-JSAUG1UH2001-EX /coll/Experiments/doc/EXR-JSAUG1UH2001-EX /coll/Experiments/doc/EXR-JSAUG1UH2001-EX url