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Update Actionabilty APIs authored by Neethu Shah's avatar Neethu Shah
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Actionabilty-APIs.md
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...@@ -170,7 +170,7 @@ Summary of actionability APIs: ...@@ -170,7 +170,7 @@ Summary of actionability APIs:
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**_CONTEXT specific_** **/{context}/ui/summ?col=consensusAssertion$search={assertion}**<br>**_CONTEXT specific_**
* [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Definitive%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Definitive%20Actionability) * [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Definitive%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Definitive%20Actionability)
* [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Definitive%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Definitive%20Actionability) * [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Definitive%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Definitive%20Actionability)
...@@ -187,7 +187,7 @@ Summary of actionability APIs: ...@@ -187,7 +187,7 @@ Summary of actionability APIs:
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**_CONTEXT specific_** /{context}/ui/summ?col=consensusAssertion$search={assertion}<br>**_CONTEXT specific_**
* [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability) * [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability)
* [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability) * [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability)
...@@ -201,7 +201,7 @@ Summary of actionability APIs: ...@@ -201,7 +201,7 @@ Summary of actionability APIs:
</td> </td>
<td> <td>
**CONTEXT specific** **/{context}/ui/summ?col=consensusAssertion$search={assertion}**<br>**CONTEXT specific**
* [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Moderate%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Moderate%20Actionability) * [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Moderate%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Moderate%20Actionability)
* [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability) * [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Strong%20Actionability)
...@@ -220,7 +220,7 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu ...@@ -220,7 +220,7 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu
</td> </td>
<td> <td>
**_CONTEXT specific_** **/{context}/ui/summ?col=consensusAssertion$search={assertion}**<br>**_CONTEXT specific_**
* [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Limited%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Limited%20Actionability) * [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Limited%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=Limited%20Actionability)
* [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Limited%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Limited%20Actionability) * [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Limited%20Actionability</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=Limited%20Actionability)
...@@ -239,16 +239,14 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu ...@@ -239,16 +239,14 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu
</td> </td>
<td> <td>
**/{context}/ui/summ?col=consensusAssertion$search={assertion}**
**_CONTEXT specific_** **_CONTEXT specific_**
* [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20expert%20review</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20expert%20review) * [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20expert%20review</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20expert%20review)
* [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20expert%20review</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20expert%20review) * [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20expert%20review</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20expert%20review)
</td> </td>
<td> <td>Same as “Total Actionability Assertions (by gene)” only filtered on Consensus Assertion = N/A Insufficient evidence: expert review</td>
Same as “Total Actionability Assertions (by gene)” only filtered on Consensus Assertion = N/A Insufficient evidence: expert review
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</tr> </tr>
<tr> <tr>
<td> <td>
...@@ -257,11 +255,13 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu ...@@ -257,11 +255,13 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu
</td> </td>
<td> <td>
**/{context}/ui/summ?col=consensusAssertion$search={assertion}**
**_CONTEXT specific_** **_CONTEXT specific_**
[<span dir="">https://actionability.cliniclagenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A</span>](https://actionability.cliniclagenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A)[<span dir=""> - Insufficient evidence: early rule-out</span>](https://actionability.cliniclagenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20early%20rule-out) <https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A>[ - Insufficient evidence: early rule-out](https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A - Insufficient evidence: early rule-out "https://actionability.clinicalgenome.org/ac/Adult/ui/summ/assertion?col=consensusAssertion&search=N/A - Insufficient evidence: early rule-out")
[<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20early%20rule-out</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=N/A%20-%20Insufficient%20evidence:%20early%20rule-out) <https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=N/A>[ - Insufficient evidence: early rule-out](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=N/A - Insufficient evidence: early rule-out "https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?col=consensusAssertion&search=N/A - Insufficient evidence: early rule-out")
</td> </td>
<td>Same as “Total Actionability Assertions (by gene)” only filtered on Consensus Assertion = N/A Insufficient evidence: early rule-out</td> <td>Same as “Total Actionability Assertions (by gene)” only filtered on Consensus Assertion = N/A Insufficient evidence: early rule-out</td>
</tr> </tr>
...@@ -272,12 +272,14 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu ...@@ -272,12 +272,14 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu
</td> </td>
<td> <td>
**/ac/{context}/ui/summ?col=overal$search={score}** **/{context}/ui/summ?col=overall$search={score}**
* [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ?col=overall&search=12 </span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ?col=overall&search=12) **_CONTEXT specific_**
* [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ?col=overall&search=12</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ?col=overall&search=12)
* [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ?col=overall&search=12</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ?col=overall&search=12)<span dir=""> </span> * [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ?col=overall&search=12</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ?col=overall&search=12)<span dir=""> </span>
</td> </td>
<td>Search by overall score </td> <td>Search by overall score</td>
</tr> </tr>
<tr> <tr>
<td> <td>
...@@ -286,6 +288,8 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu ...@@ -286,6 +288,8 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu
</td> </td>
<td> <td>
**/{context}/ui/summ?col=overall&search={score}&matchOp=<=**
**_CONTEXT specific_** **_CONTEXT specific_**
* <https://actionability.clinicalgenome.org/ac/Adult/ui/summ?col=overall&search=5&matchOp=%3C=> * <https://actionability.clinicalgenome.org/ac/Adult/ui/summ?col=overall&search=5&matchOp=%3C=>
...@@ -302,7 +306,7 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu ...@@ -302,7 +306,7 @@ Same as “Total Actionability Assertions (by gene)” only filtered on Consensu
**_CONTEXT specific_** **_CONTEXT specific_**
**/ac/{context}/ui/summ?searchType=oiScored** **/{context}/ui/summ?searchType=oiScored**
[<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ?searchType=oiScored</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ?searchType=oiScored) [<span dir="">https://actionability.clinicalgenome.org/ac/Adult/ui/summ?searchType=oiScored</span>](https://actionability.clinicalgenome.org/ac/Adult/ui/summ?searchType=oiScored)
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