... | ... | @@ -107,32 +107,60 @@ Summary of actionability APIs: |
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<span dir="">Includes gene-disease pairs that were part of reports that are “Released” or “Released – Under Revision.” To find these records go to Adult Summaries -> Overall Scores; exclude retracted rows. Use the same process to identify peds records by going to Pediatric Summaries -> Overall scores.</span>
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* <span dir="">Exclude records with OMIM = “(No paired disease(s) for gene).”</span>
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* <span dir=""> Use Gene OMIM and OMIM for the gene-disease pairs.</span>
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* <span dir="">Use Gene OMIM and OMIM for the gene-disease pairs.</span>
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* <span dir="">If the same gene-disease pair is listed in adults and peds reports, these should be counted as two separate gene-disease pairs.</span>
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* <span dir=""> If the same gene-disease pair is listed records with different doc IDs, these should be counted separately.</span>
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* <span dir="">If the same gene-disease pair is listed records with different doc IDs, these should be counted separately.</span>
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* <span dir="">Remove all other duplicates.</span>
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<span dir="">Total Actionability Assertions (by gene)</span>
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**_CONTEXT specific_**
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* [<span dir="">https://actionability.clinicalgenome.org/ac /Adult/ui/summ/assertion?searchType=allassertions</span>](https://actionability.clinicalgenome.org/ac)
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* [<span dir="">https://actionability.clinicalgenome.org/ac /Pediatric/ui/summ/assertion?searchType=allassertions</span>](https://actionability.clinicalgenome.org/ac)
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<span dir="">Sum of all assertions except “Assertion Pending.” The AK-Repo has separate adult and peds files, these should be combined in this section.</span>
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<span dir="">To find these records go to Adult Summaries -> Consensus Assertions. Use the same process to identify peds records by going to Pediatric Summaries -> Overall scores.</span>
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* <span dir="">Status-overall = Released only; Exclude records with Status-overall = Retracted</span>
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* <span dir="">Consensus Assertion = Definitive, Strong, Moderate, Limited, N/A – Insufficient evidence: early rule-out, or N/A – Insufficient evidence: expert review</span>
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* <span dir="">If the same gene-disease pair is listed in adults and peds reports, these should be counted as two separate gene-disease pairs</span>
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* <span dir=""> If the same gene-disease pair is listed records with different doc IDs, these should be counted separately</span>
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* <span dir="">Removing duplicates should be unnecessary</span>
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<span dir="">Assertions Under Revision</span>
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**_CONTEXT specific_**
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* [<span dir="">https://actionability.clinicalgenome.org/ac Adult/ui/summ/assertion?searchType=assertionsUnderRevision</span>](https://actionability.clinicalgenome.org/ac)
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* [<span dir="">https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?searchType=assertionsUnderRevision</span>](https://actionability.clinicalgenome.org/ac/Pediatric/ui/summ/assertion?searchType=assertionsUnderRevision)
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</td>
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<span dir="">“Assertion pending” assertions</span>
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<span dir="">To find these records go to Adult Summaries -> Consensus Assertions. Use the same process to identify peds records by going to Pediatric Summaries -> Overall scores.</span>
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* <span dir="">Status-overall = Released only; Exclude records with Status-overall = Retracted</span>
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* <span dir="">Consensus Assertion = Assertion Pending</span>
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* <span dir=""> If the same gene-disease pair is listed in adults and peds reports, these should be counted as two separate gene-disease pairs</span>
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* <span dir="">If the same gene-disease pair is listed records with different doc IDs, these should be counted separately</span>
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* <span dir="">Removing duplicates should be unnecessary</span>
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</td>
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</tr>
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</table>
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