alias: DS13229
expected_number_runs: 2
expected_number_spots: 25000000
expected_number_reads: 25000000
center_name: NREMC

STUDY_REF: UwStam_NREMC_CA
SAMPLE_DESCRIPTOR: IMR90

LIBRARY
LIBRARY_NAME: DS13229
LIBRARY_STRATEGY: DNAse-Hypersensitivity
LIBRARY_SOURCE: GENOMIC
LIBRARY_SELECTION: DNAse
LIBRARY_LAYOUT: SINGLE
LIBRARY_CONSTRUCTION_PROTOCOL: Single read - Illumina

SPOT
NUMBER_OF_READS_PER_SPOT: 1
READ_INDEX: 0
READ_CLASS: Application Read
READ_TYPE: Forward
BASE_COORD: 1

PLATFORM
ILLUMINA
INSTRUMENT_MODEL: Illumina Genome Analyzer II
CYCLE_SEQUENCE: 36
CYCLE_COUNT: 36

BASE CALLS
SEQUENCE_SPACE: Base Space
BASE_CALLER: Bustard1.4.0

QUALITY SCORES
Quality Type: other
QUALITY_SCORER: Solexa primary analysis
NUMBER_OF_LEVELS: 80
MULTIPLIER: 1.0

ATTRIBUTES
EXPERIMENT_TYPE: Chromatin Accessibility
EXTRACTION_PROTOCOL: Qiagen minElut
DNASE_PROTOCOL: Stamlab DNase Protocol