|
|
| Home | Browser | Tools | Log Out |
Help
|
Genboree Home |
Sequence Tag Counts of Breast Stem Cells smRNA-Seq Data
Illumina reads produced by smRNA-Seq on Breast Stem Cells, Donor RM080 had the sequence trimmed for adapters and the count of unique sequences calculated.
Project News:
2011/8/30:
ANALYSIS XML file 'ucsf-ubc.smrna-seq.level.2.tags.xml' uploaded
alias: M00740-1.hg19.level.2.tag
Analysis Center: EDACC
Analysis File Type: .tab
Analysis File Name: UCSF-UBC.Breast_Stem_Cells.smRNA-Seq.RM080.tag.tab
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: smRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
RELEASE_NUMBER: Human Epigenome Atlas 4
NUMBER_OF_MAPPED_READS: 4,613,874
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA: 46.42
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA_PERCENTILE: 7
MAXIMUM_REPLICATE_CORRELATION: NA
Analysis Center: EDACC
Analysis File Type: .tab
Analysis File Name: UCSF-UBC.Breast_Stem_Cells.smRNA-Seq.RM080.tag.tab
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: smRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
RELEASE_NUMBER: Human Epigenome Atlas 4
NUMBER_OF_MAPPED_READS: 4,613,874
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA: 46.42
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA_PERCENTILE: 7
MAXIMUM_REPLICATE_CORRELATION: NA
|
© 2001-2024 Baylor College of Medicine
Bioinformatics Research Laboratory (400D Jewish Wing, MS:BCM225, 1 Baylor Plaza, Houston, TX 77030) |