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Raw Signal Density Graphs of Mobilized CD34 Primary Cells Histone H3K4me1 ChIP-Seq Data
Illumina Histone H3K4me1 ChIP-Seq read mappings from Mobilized CD34 Primary Cells, Donor RO 01562 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/7/27:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: Lib:RI:20100603:07--ChIP:MA:20100517:07:Mobilized CD34:H3K4Me1.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01562.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: MCD34 H3K4me1 62
BROWSER_TRACK_DESCRIPTION: BI Mobilized CD34 Primary Cells Histone H3K4me1 Donor RO 01562 Library Lib:RI:20100603:07--ChIP:MA:20100517:07:Mobilized Mobilized CD34:H3K4Me1 EA Release 4
NUMBER_OF_MAPPED_READS: 30,730,425
NUMBER_OF_H3K4me1_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 12
FINDPEAKS_SCORE: 0.6924
FINDPEAKS_PERCENTILE: 100
HOTSPOT_SCORE: 0.6649
HOTSPOT_PERCENTILE: 100
IROC_SCORE: 0.9998
IROC_PERCENTILE: 100
POISSON_SCORE: 0.7374
POISSON_PERCENTILE: 100
MAXIMUM_REPLICATE_CORRELATION: 0.98
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01562.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: MCD34 H3K4me1 62
BROWSER_TRACK_DESCRIPTION: BI Mobilized CD34 Primary Cells Histone H3K4me1 Donor RO 01562 Library Lib:RI:20100603:07--ChIP:MA:20100517:07:Mobilized Mobilized CD34:H3K4Me1 EA Release 4
NUMBER_OF_MAPPED_READS: 30,730,425
NUMBER_OF_H3K4me1_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 12
FINDPEAKS_SCORE: 0.6924
FINDPEAKS_PERCENTILE: 100
HOTSPOT_SCORE: 0.6649
HOTSPOT_PERCENTILE: 100
IROC_SCORE: 0.9998
IROC_PERCENTILE: 100
POISSON_SCORE: 0.7374
POISSON_PERCENTILE: 100
MAXIMUM_REPLICATE_CORRELATION: 0.98
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