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Raw Signal Density Graphs of Fetal Renal Pelvis Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Renal Pelvis, Donor H-23833, Library DS17451 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/6/22:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.4.xml' uploaded
alias: DS17451.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Pelvis.ChromatinAccessibility.H-23833.DS17451.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FRP DNase 33 51
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Pelvis DNase Hypersensitivity Donor H-23833 Library DS17451 EA Release 4
NUMBER_OF_MAPPED_READS: 36,563,105
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3838
FINDPEAKS_PERCENTILE: 50
HOTSPOT_SCORE: 0.3726
HOTSPOT_PERCENTILE: 46
IROC_SCORE: 0.9905
IROC_PERCENTILE: 17
POISSON_SCORE: 0.4517
POISSON_PERCENTILE: 57
MAXIMUM_REPLICATE_CORRELATION: 0.98
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Pelvis.ChromatinAccessibility.H-23833.DS17451.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FRP DNase 33 51
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Pelvis DNase Hypersensitivity Donor H-23833 Library DS17451 EA Release 4
NUMBER_OF_MAPPED_READS: 36,563,105
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3838
FINDPEAKS_PERCENTILE: 50
HOTSPOT_SCORE: 0.3726
HOTSPOT_PERCENTILE: 46
IROC_SCORE: 0.9905
IROC_PERCENTILE: 17
POISSON_SCORE: 0.4517
POISSON_PERCENTILE: 57
MAXIMUM_REPLICATE_CORRELATION: 0.98
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