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Mapping of Fetal Renal Cortex Left Chromatin Accessibility Data
Illumina reads produced by DNAse-Seq on Fetal Renal Cortex Left, Donor H-23871, Library DS17550 were mapped to the human genome using Pash.
Project News:
2011/6/22: ANALYSIS XML file 'uw.chromatin.accessibility.level.1.release.4.xml' uploaded
alias: DS17550.hg19.level.1.release.4
Analysis Center: EDACC Analysis File Type: .bed Analysis File Name: UW.Fetal_Renal_Cortex_Left.ChromatinAccessibility.H-23871.DS17550.bed DATA_ANALYSIS_LEVEL: 1 EXPERIMENT_TYPE: Chromatin Accessibility GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: Pash SOFTWARE_VERSION: 3.0 MAXIMUM_ALIGNMENT_LENGTH: Read length MISMATCHES_ALLOWED: 10% of read length ALIGNMENTS_ALLOWED: 1 TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration. TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None ALIGNMENT_POSTPROCESSING: None RELEASE_NUMBER: Human Epigenome Atlas 4 NUMBER_OF_MAPPED_READS: 33,274,534 NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 54 FINDPEAKS_SCORE: 0.4319 FINDPEAKS_PERCENTILE: 70 HOTSPOT_SCORE: 0.4242 HOTSPOT_PERCENTILE: 63 IROC_SCORE: 0.9928 IROC_PERCENTILE: 35 POISSON_SCORE: 0.5081 POISSON_PERCENTILE: 72 MAXIMUM_REPLICATE_CORRELATION: NA |
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