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Mapping of Fetal Heart Digital Genomic Footprinting Data
Illumina reads produced by Digital Genomic Footprinting on Fetal Heart, Donor H-22662, Library DGF.DS12531 were mapped to the human genome using Pash.
Project News:
2011/6/14: ANALYSIS XML file 'uw.digitalGenomicFootprinting.level.1.xml' uploaded
alias: DGF.DS12531.hg19.level.1.release.4
Analysis Center: EDACC Analysis File Type: .bed Analysis File Name: UW.Fetal_Heart.Digital_Genomic_Footprinting.H-22662.DGF.DS12531.bed DATA_ANALYSIS_LEVEL: 1 EXPERIMENT_TYPE: Digital Genomic Footprinting GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: Pash SOFTWARE_VERSION: 3.0 MAXIMUM_ALIGNMENT_LENGTH: Read length MISMATCHES_ALLOWED: 10% of read length ALIGNMENTS_ALLOWED: 1 TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration. TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None ALIGNMENT_POSTPROCESSING: None RELEASE_NUMBER: Human Epigenome Atlas 4 NUMBER_OF_MAPPED_READS: 282,391,646 NUMBER_OF_DIGITAL_GENOMIC_FOOTPRINTING_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 5 FINDPEAKS_SCORE: 0.5452 FINDPEAKS_PERCENTILE: 40 HOTSPOT_SCORE: 0.5269 HOTSPOT_PERCENTILE: 40 IROC_SCORE: 1.0 IROC_PERCENTILE: 100 POISSON_SCORE: 0.5695 POISSON_PERCENTILE: 40 |
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