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Raw Signal Density Graphs of CD34 Cultured Cells Histone H3K4me1 ChIP-Seq Data
Illumina Histone H3K4me1 ChIP-Seq read mappings from CD34 Cultured Cells, Donor 123 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/18:
ANALYSIS XML file 'bi.chip-seq.level.2.release.3.xml' uploaded
alias: Lib:RI:20101012:01--ChIP:MA:20100927:01:CD34 expanded:H3K4Me1.hg19.level.2.release.3
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD34_Cultured_Cells.H3K4me1.123.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: CD34 H3K4me1 23
BROWSER_TRACK_DESCRIPTION: BI CD34 Cultured Cells Histone H3K4me1 Donor 123 Library Lib:RI:20101012:01--ChIP:MA:20100927:01:CD34 expanded:H3K4Me1 EA Release 3
NUMBER_OF_H3K4me1_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 50
FINDPEAKS_SCORE: 0.3943
FINDPEAKS_PERCENTILE: 61
HOTSPOT_SCORE: 0.421
HOTSPOT_PERCENTILE: 57
IROC_SCORE: 0.9955
IROC_PERCENTILE: 71
POISSON_SCORE: 0.5144
POISSON_PERCENTILE: 54
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD34_Cultured_Cells.H3K4me1.123.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: CD34 H3K4me1 23
BROWSER_TRACK_DESCRIPTION: BI CD34 Cultured Cells Histone H3K4me1 Donor 123 Library Lib:RI:20101012:01--ChIP:MA:20100927:01:CD34 expanded:H3K4Me1 EA Release 3
NUMBER_OF_H3K4me1_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 50
FINDPEAKS_SCORE: 0.3943
FINDPEAKS_PERCENTILE: 61
HOTSPOT_SCORE: 0.421
HOTSPOT_PERCENTILE: 57
IROC_SCORE: 0.9955
IROC_PERCENTILE: 71
POISSON_SCORE: 0.5144
POISSON_PERCENTILE: 54
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