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Raw Signal Density Graphs of CD4 Primary Cells Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from CD4 Primary Cells, Donor RO 01670, Library DS15947 were processed into density graphs of raw signal representing the aligned read density.

Project News:
2011/3/17:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.3.xml' uploaded


alias: DS15947.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.CD4_Primary_Cells.ChromatinAccessibility.RO_01549.DS15947.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: CD4 DNase 70 47
BROWSER_TRACK_DESCIPTION: UW CD4 Primary Cells DNase Hypersensitivity Donor RO 01549 Library DS15947 EA Release 3
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 39
FINDPEAKS_SCORE: 0.335
FINDPEAKS_PERCENTILE: 38
HOTSPOT_SCORE: 0.356
HOTSPOT_PERCENTILE: 44
IROC_SCORE: 0.9937
IROC_PERCENTILE: 46
POISSON_SCORE: 0.3675
POISSON_PERCENTILE: 15

 

 

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