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Raw Signal Density Graphs of CD3 Primary Cells Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from CD3 Primary Cells, Donor RO 01721, Library DS17198 were processed into density graphs of raw signal representing the aligned read density.

Project News:
2011/3/17:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.3.xml' uploaded


alias: DS17198.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.CD3_Primary_Cells.ChromatinAccessibility.RO_01679.DS17198.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: CD3 DNase 21 98
BROWSER_TRACK_DESCIPTION: UW CD3 Primary Cells DNase Hypersensitivity Donor RO 01679 Library DS17198 EA Release 3
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 39
FINDPEAKS_SCORE: 0.4798
FINDPEAKS_PERCENTILE: 82
HOTSPOT_SCORE: 0.4876
HOTSPOT_PERCENTILE: 82
IROC_SCORE: 0.9973
IROC_PERCENTILE: 95
POISSON_SCORE: 0.4584
POISSON_PERCENTILE: 54

 

 

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