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Raw Signal Density Graphs of Breast vHMEC smRNA-Seq Data
Illumina smRNA-Seq read mappings from Breast vHMEC, Donor RM035 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/11/5:
ANALYSIS XML file 'ucsf-ubc.smrna-seq.level.1-2.xml' uploaded
alias: HS1740-1_430N8AAXX.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Breast_vHMEC.smRNA-Seq.RM035.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: smRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: Bv smRNA 35
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-UCD Breast vHMEC smRNA-Seq Donor RM035 EA Release 2
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA: 84.41
PERCENT_READS_MAPPING_TO_REPEATMASKER_RNA_REPEATS: 5.0
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Breast_vHMEC.smRNA-Seq.RM035.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: smRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: Bv smRNA 35
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-UCD Breast vHMEC smRNA-Seq Donor RM035 EA Release 2
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA: 84.41
PERCENT_READS_MAPPING_TO_REPEATMASKER_RNA_REPEATS: 5.0
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