|
|||||||||
Mapping of IMR90 Cell Line Histone H4K8ac ChIP-Seq Data
Illumina reads produced by Histone H4K8ac ChIP-Seq on the IMR90 Cell Line, Library YL142 were mapped to the human genome using Pash.
Project News:
2010/11/5: ANALYSIS XML file 'ucsd.chip-seq.level.1.v2.xml' uploaded
alias: renlab.H4K8ac.IMR90-04.01.hg19.level.1
Analysis Center: EDACC Analysis File Type: .bed Analysis File Name: UCSD.IMR90.H4K8ac.YL142.bed DATA_ANALYSIS_LEVEL: 1 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: Pash SOFTWARE_VERSION: 3.0 MAXIMUM_ALIGNMENT_LENGTH: Read length MISMATCHES_ALLOWED: 10% of read length ALIGNMENTS_ALLOWED: 10 TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 10 positions it is removed from consideration. TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. ALIGNMENT_POSTPROCESSING: None READ_EXTENSION: 200bp RELEASE_NUMBER: Human Epigenome Atlas 2 NUMBER_OF_H4K8ac_EXPERIMENTS_SCORED: 4 FINDPEAKS_SCORE: 0.5908 FINDPEAKS_PERCENTILE: 50 HOTSPOT_SCORE: 0.4842 HOTSPOT_PERCENTILE: 50 IROC_SCORE: 0.993 IROC_PERCENTILE: 50 POISSON_SCORE: 0.6683 POISSON_PERCENTILE: 50 |
|||||||||
|
|||||||||