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Raw Signal Density Graphs of CD34 Primary Cells Histone H3K36me3 ChIP-Seq Data
Illumina Histone H3K36me3 ChIP-Seq read mappings from CD34 Primary Cells, Donor UW RO 01536 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/11/2:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: Lib:RI:20100517:07--ChIP:Thanh:20100504:07:Mobilized CD34:H3K36Me3.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD34_Primary_Cells.H3K36me3.UW_RO_01536.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: CD34 H3K36me3 36
BROWSER_TRACK_DESCRIPTION: BI CD34 Primary Cells Histone H3K36me3 Donor UW RO 01536 EA Release 2
NUMBER_OF_H3K36me3_EXPERIMENTS_SCORED: 42
FINDPEAKS_SCORE: 0.027
FINDPEAKS_PERCENTILE: 7
HOTSPOT_SCORE: 0.1295
HOTSPOT_PERCENTILE: 8
IROC_SCORE: 0.709
IROC_PERCENTILE: 6
POISSON_SCORE: 0.2408
POISSON_PERCENTILE: 2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD34_Primary_Cells.H3K36me3.UW_RO_01536.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: CD34 H3K36me3 36
BROWSER_TRACK_DESCRIPTION: BI CD34 Primary Cells Histone H3K36me3 Donor UW RO 01536 EA Release 2
NUMBER_OF_H3K36me3_EXPERIMENTS_SCORED: 42
FINDPEAKS_SCORE: 0.027
FINDPEAKS_PERCENTILE: 7
HOTSPOT_SCORE: 0.1295
HOTSPOT_PERCENTILE: 8
IROC_SCORE: 0.709
IROC_PERCENTILE: 6
POISSON_SCORE: 0.2408
POISSON_PERCENTILE: 2
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