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Raw Signal Density Graphs of Adult Liver Histone H3K4me3 ChIP-Seq Data
Illumina Histone H3K4me3 ChIP-Seq read mappings from Adult Liver, Donor 4 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/11/2:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: Lib:XZ:20100104:04--ChIP:XZ:20091228:04:hLiver:H3K4Me3.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Adult_Liver.H3K4me3.4.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: AL H3K4me3 4
BROWSER_TRACK_DESCRIPTION: BI Adult Liver Histone H3K4me3 Donor 4 EA Release 2
NUMBER_OF_H3K4me3_EXPERIMENTS_SCORED: 50
FINDPEAKS_SCORE: 0.2345
FINDPEAKS_PERCENTILE: 21
HOTSPOT_SCORE: 0.2413
HOTSPOT_PERCENTILE: 15
IROC_SCORE: 0.9999
IROC_PERCENTILE: 74
POISSON_SCORE: 0.3574
POISSON_PERCENTILE: 19
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Adult_Liver.H3K4me3.4.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: AL H3K4me3 4
BROWSER_TRACK_DESCRIPTION: BI Adult Liver Histone H3K4me3 Donor 4 EA Release 2
NUMBER_OF_H3K4me3_EXPERIMENTS_SCORED: 50
FINDPEAKS_SCORE: 0.2345
FINDPEAKS_PERCENTILE: 21
HOTSPOT_SCORE: 0.2413
HOTSPOT_PERCENTILE: 15
IROC_SCORE: 0.9999
IROC_PERCENTILE: 74
POISSON_SCORE: 0.3574
POISSON_PERCENTILE: 19
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