|
|||||||||
Mapping of H1 Cell Line Histone H3K27me3 ChIP-Seq Data
Illumina reads produced by Histone H3K27me3 ChIP-Seq on the H1 Cell Line, Library Solexa-8039 were mapped to the human genome using Pash.
Project News:
2010/11/2: ANALYSIS XML file 'bi.chip-seq.level.1.xml' uploaded
alias: 30CMAAAXX081006-2-S.hg19.level.1
Analysis Center: EDACC Analysis File Type: .bed Analysis File Name: BI.H1.H3K27me3.Solexa-8039.bed DATA_ANALYSIS_LEVEL: 1 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: Pash SOFTWARE_VERSION: 3.0 MAXIMUM_ALIGNMENT_LENGTH: Read length MISMATCHES_ALLOWED: 10% of read length ALIGNMENTS_ALLOWED: 10 TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 10 positions it is removed from consideration. TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. ALIGNMENT_POSTPROCESSING: None READ_EXTENSION: 200bp RELEASE_NUMBER: Human Epigenome Atlas 2 NUMBER_OF_H3K27me3_EXPERIMENTS_SCORED: 42 FINDPEAKS_SCORE: 0.2329 FINDPEAKS_PERCENTILE: 67 HOTSPOT_SCORE: 0.2783 HOTSPOT_PERCENTILE: 71 IROC_SCORE: 0.9954 IROC_PERCENTILE: 96 POISSON_SCORE: 0.3694 POISSON_PERCENTILE: 15 |
|||||||||
|
|||||||||