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Raw Signal Density Graphs of Fetal Brain Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Brain, Donor H-23266, Library DS14717 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/10/22:
ANALYSIS XML file 'uw.chromatinAccessibility.level2.release2.xml' uploaded
alias: DS14717.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Brain.ChromatinAccessibility.H-23266.DS14717.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: FB DNase 66 17
BROWSER_TRACK_DESCRIPTION: UW Fetal Brain DNase Hypersensitivity Donor H-23266 Library DS14717 EA Release 2
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED: 40
FINDPEAKS_SCORE: 0.5266
FINDPEAKS_PERCENTILE: 42
HOTSPOT_SCORE: 0.3922
HOTSPOT_PERCENTILE: 32
IROC_SCORE: 0.9954
IROC_PERCENTILE: 25
POISSON_SCORE: 0.5137
POISSON_PERCENTILE: 55
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Brain.ChromatinAccessibility.H-23266.DS14717.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: FB DNase 66 17
BROWSER_TRACK_DESCRIPTION: UW Fetal Brain DNase Hypersensitivity Donor H-23266 Library DS14717 EA Release 2
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED: 40
FINDPEAKS_SCORE: 0.5266
FINDPEAKS_PERCENTILE: 42
HOTSPOT_SCORE: 0.3922
HOTSPOT_PERCENTILE: 32
IROC_SCORE: 0.9954
IROC_PERCENTILE: 25
POISSON_SCORE: 0.5137
POISSON_PERCENTILE: 55
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