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Mapping of Penis Foreskin Melanocyte Primary Cells Chromatin Accessibility Data
Illumina reads produced by DNAse-Seq on Penis Foreskin Melanocyte Primary Cells, Donor skin02, Library DNase.DS19662 were mapped to the human genome using Pash.
Project News:
2013/7/26:
ANALYSIS XML file 'uw.chromatin.accessibility.level.1.xml' uploaded
alias: DNase.DS19662.hg19.level.1.release.9
Analysis Center: EDACC
Analysis File Type: .bed
Analysis File Name: UW.Penis_Foreskin_Melanocyte_Primary_Cells.ChromatinAccessibility.skin02.DNase.DS19662.bed
DATA_ANALYSIS_LEVEL: 1
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: Pash
SOFTWARE_VERSION: 3.0
MAXIMUM_ALIGNMENT_LENGTH: Read length
MISMATCHES_ALLOWED: 10% of read length
ALIGNMENTS_ALLOWED: 1
TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration.
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None
ALIGNMENT_POSTPROCESSING: None
RELEASE_NUMBER: Human Epigenome Atlas 9
NUMBER_OF_MAPPED_READS: 45,958,227
FINDPEAKS_SCORE: 0.2486
FINDPEAKS_PERCENTILE: 4
HOTSPOT_SCORE: 0.2686
HOTSPOT_PERCENTILE: 9
IROC_SCORE: 0.9972
IROC_PERCENTILE: 93
POISSON_SCORE: 0.3075
POISSON_PERCENTILE: 4
MAXIMUM_REPLICATE_CORRELATION: 0.98
Analysis Center: EDACC
Analysis File Type: .bed
Analysis File Name: UW.Penis_Foreskin_Melanocyte_Primary_Cells.ChromatinAccessibility.skin02.DNase.DS19662.bed
DATA_ANALYSIS_LEVEL: 1
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: Pash
SOFTWARE_VERSION: 3.0
MAXIMUM_ALIGNMENT_LENGTH: Read length
MISMATCHES_ALLOWED: 10% of read length
ALIGNMENTS_ALLOWED: 1
TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration.
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None
ALIGNMENT_POSTPROCESSING: None
RELEASE_NUMBER: Human Epigenome Atlas 9
NUMBER_OF_MAPPED_READS: 45,958,227
FINDPEAKS_SCORE: 0.2486
FINDPEAKS_PERCENTILE: 4
HOTSPOT_SCORE: 0.2686
HOTSPOT_PERCENTILE: 9
IROC_SCORE: 0.9972
IROC_PERCENTILE: 93
POISSON_SCORE: 0.3075
POISSON_PERCENTILE: 4
MAXIMUM_REPLICATE_CORRELATION: 0.98
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