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Raw Signal Density Graphs of Pancreas Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Pancreas, Donor STL002, Library DNase.DS20842 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2013/7/26:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DNase.DS20842.hg19.level.2.release.9
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Pancreas.ChromatinAccessibility.STL002.DNase.DS20842.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: Pancreas DNase 02 42
BROWSER_TRACK_DESCRIPTION: UW Pancreas DNase Hypersensitivity Donor STL002 Library DNase.DS20842 EA Release 9
NUMBER_OF_MAPPED_READS: 54,151,447
FINDPEAKS_SCORE: 0.259
FINDPEAKS_PERCENTILE: 7
HOTSPOT_SCORE: 0.265
HOTSPOT_PERCENTILE: 7
IROC_SCORE: 0.9922
IROC_PERCENTILE: 43
POISSON_SCORE: 0.3183
POISSON_PERCENTILE: 7
MAXIMUM_REPLICATE_CORRELATION: 0.98
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Pancreas.ChromatinAccessibility.STL002.DNase.DS20842.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: Pancreas DNase 02 42
BROWSER_TRACK_DESCRIPTION: UW Pancreas DNase Hypersensitivity Donor STL002 Library DNase.DS20842 EA Release 9
NUMBER_OF_MAPPED_READS: 54,151,447
FINDPEAKS_SCORE: 0.259
FINDPEAKS_PERCENTILE: 7
HOTSPOT_SCORE: 0.265
HOTSPOT_PERCENTILE: 7
IROC_SCORE: 0.9922
IROC_PERCENTILE: 43
POISSON_SCORE: 0.3183
POISSON_PERCENTILE: 7
MAXIMUM_REPLICATE_CORRELATION: 0.98
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