|
|
| Home | Browser | Tools | Log Out |
Help
|
Genboree Home |
Raw Signal Density Graphs of CD4+ CD25- Th Primary Cells H3K27me3 ChIP-Seq Data
Illumina H3K27me3 ChIP-Seq read mappings from CD4+ CD25- Th Primary Cells, Donor Donor 332, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2013/7/15:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 2274.hg19.level.2.release.9
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_332.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: CCT H3K27me3 32 74
BROWSER_TRACK_DESCRIPTION: BI CD4+ CD25- Th Primary Cells Histone H3K27me3 Donor 332 Library DNA_Lib 2274 EA Release 9
NUMBER_OF_MAPPED_READS: 13,319,513
FINDPEAKS_SCORE: 0.0619
FINDPEAKS_PERCENTILE: 46
HOTSPOT_SCORE: 0.2052
HOTSPOT_PERCENTILE: 64
IROC_SCORE: 0.8129
IROC_PERCENTILE: 31
POISSON_SCORE: 0.3354
POISSON_PERCENTILE: 48
MAXIMUM_REPLICATE_CORRELATION: 0.98
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_332.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: CCT H3K27me3 32 74
BROWSER_TRACK_DESCRIPTION: BI CD4+ CD25- Th Primary Cells Histone H3K27me3 Donor 332 Library DNA_Lib 2274 EA Release 9
NUMBER_OF_MAPPED_READS: 13,319,513
FINDPEAKS_SCORE: 0.0619
FINDPEAKS_PERCENTILE: 46
HOTSPOT_SCORE: 0.2052
HOTSPOT_PERCENTILE: 64
IROC_SCORE: 0.8129
IROC_PERCENTILE: 31
POISSON_SCORE: 0.3354
POISSON_PERCENTILE: 48
MAXIMUM_REPLICATE_CORRELATION: 0.98
|
© 2001-2024 Baylor College of Medicine
Bioinformatics Research Laboratory (400D Jewish Wing, MS:BCM225, 1 Baylor Plaza, Houston, TX 77030) |