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Raw Signal Density Graphs of Placenta Amnion H3K27me3 ChIP-Seq Data
Illumina H3K27me3 ChIP-Seq read mappings from Placenta Amnion, Donor CTL02 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2013/6/13: ANALYSIS XML file 'ucsf-ubc.chip-seq.level.2.xml' uploaded
alias: A21720-1.hg19.level.2.release.9
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSF-UBC.Placenta_Amnion.H3K27me3.CTL02.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 9 BROWSER_TRACK_NAME: PA H3K27me3 02 20 BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Placenta Amnion Histone H3K27me3 Donor CTL02 Library A21720 EA Release 9 NUMBER_OF_MAPPED_READS: 27,757,878 FINDPEAKS_SCORE: 0.018 FINDPEAKS_PERCENTILE: 14 HOTSPOT_SCORE: 0.0551 HOTSPOT_PERCENTILE: 5 IROC_SCORE: 0.8982 IROC_PERCENTILE: 56 POISSON_SCORE: 0.1416 POISSON_PERCENTILE: 2 MAXIMUM_REPLICATE_CORRELATION: NA |
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