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Raw Signal Density Graphs of Fetal Muscle Leg H3K9me3 ChIP-Seq Data
Illumina H3K9me3 ChIP-Seq read mappings from Fetal Muscle Leg, Donor H-24644, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2013/6/13:
ANALYSIS XML file 'uw.chip-seq.level.2.xml' uploaded
alias: Histone.DS22903-Histone.DS22903.hg19.level.2.release.9
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Muscle_Leg.H3K9me3.H-24644.Histone.DS22903.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: FML H3K9me3 44 03
BROWSER_TRACK_DESCRIPTION: UW Fetal Muscle Leg Histone H3K9me3 Donor H-24644 Library Histone.DS22903 EA Release 9
NUMBER_OF_MAPPED_READS: 25,833,032
FINDPEAKS_SCORE: 0.0627
FINDPEAKS_PERCENTILE: 56
HOTSPOT_SCORE: 0.1471
HOTSPOT_PERCENTILE: 58
IROC_SCORE: 0.8554
IROC_PERCENTILE: 66
POISSON_SCORE: 0.3206
POISSON_PERCENTILE: 56
MAXIMUM_REPLICATE_CORRELATION: 0.98
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Muscle_Leg.H3K9me3.H-24644.Histone.DS22903.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: FML H3K9me3 44 03
BROWSER_TRACK_DESCRIPTION: UW Fetal Muscle Leg Histone H3K9me3 Donor H-24644 Library Histone.DS22903 EA Release 9
NUMBER_OF_MAPPED_READS: 25,833,032
FINDPEAKS_SCORE: 0.0627
FINDPEAKS_PERCENTILE: 56
HOTSPOT_SCORE: 0.1471
HOTSPOT_PERCENTILE: 58
IROC_SCORE: 0.8554
IROC_PERCENTILE: 66
POISSON_SCORE: 0.3206
POISSON_PERCENTILE: 56
MAXIMUM_REPLICATE_CORRELATION: 0.98
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