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Raw Signal Density Graphs of Brain Hippocampus Middle mRNA-Seq Data
Illumina mRNA-Seq read mappings from Brain Hippocampus Middle, Donor 149 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2013/6/11:
ANALYSIS XML file 'bi.mrna-seq.level.2.xml' uploaded
alias: cDNA_Lib 2.hg19.level.2.release.9
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Brain_Hippocampus_Middle.mRNA-Seq.149.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: mRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: BHM mRNA 49
BROWSER_TRACK_DESCRIPTION: BI Brain Hippocampus Middle mRNA-Seq Donor 149 Library cDNA_Lib 2 EA Release 9
NUMBER_OF_MAPPED_READS: 103,897,010
PERCENT_READS_MAPPING_TO_UCSC_GENES: 69.68
PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 1
MAXIMUM_REPLICATE_CORRELATION: 0.58
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Brain_Hippocampus_Middle.mRNA-Seq.149.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: mRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: BHM mRNA 49
BROWSER_TRACK_DESCRIPTION: BI Brain Hippocampus Middle mRNA-Seq Donor 149 Library cDNA_Lib 2 EA Release 9
NUMBER_OF_MAPPED_READS: 103,897,010
PERCENT_READS_MAPPING_TO_UCSC_GENES: 69.68
PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 1
MAXIMUM_REPLICATE_CORRELATION: 0.58
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