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Mapping of Penis Foreskin Melanocyte Primary Cells Digital Genomic Footprinting Data
Illumina reads produced by Digital Genomic Footprinting on Penis Foreskin Melanocyte Primary Cells, Donor skin01, Library DGF.DS18590 were mapped to the human genome using Pash.


Project News:
2012/12/31:
ANALYSIS XML file 'uw.digitalGenomicFootprinting.level.1.xml' uploaded



alias: DGF.DS18590.hg19.level.1.release.9
Analysis Center: EDACC
Analysis File Type: .bed
Analysis File Name: UW.Penis_Foreskin_Melanocyte_Primary_Cells.Digital_Genomic_Footprinting.skin01.DGF.DS18590.bed
DATA_ANALYSIS_LEVEL: 1
EXPERIMENT_TYPE: Digital Genomic Footprinting
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: Pash
SOFTWARE_VERSION: 3.0
MAXIMUM_ALIGNMENT_LENGTH: Read length
MISMATCHES_ALLOWED: 10% of read length
ALIGNMENTS_ALLOWED: 1
TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration.
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None
ALIGNMENT_POSTPROCESSING: None
RELEASE_NUMBER: Human Epigenome Atlas 9
NUMBER_OF_MAPPED_READS: 230,373,033
NUMBER_OF_DIGITAL_GENOMIC_FOOTPRINTING_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 11
FINDPEAKS_SCORE: 0.4924
FINDPEAKS_PERCENTILE: 64
HOTSPOT_SCORE: 0.5171
HOTSPOT_PERCENTILE: 64
IROC_SCORE: 0.9898
IROC_PERCENTILE: 27
POISSON_SCORE: 0.5488
POISSON_PERCENTILE: 64
MAXIMUM_REPLICATE_CORRELATION: NA

 

 


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