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Mapping of Fetal Intestine Small Digital Genomic Footprinting Data
Illumina reads produced by Digital Genomic Footprinting on Fetal Intestine Small, Donor H-23769, Library DGF.DS17317 were mapped to the human genome using Pash.
Project News:
2012/12/31: ANALYSIS XML file 'uw.digitalGenomicFootprinting.level.1.xml' uploaded
alias: DGF.DS17317.hg19.level.1.release.9
Analysis Center: EDACC Analysis File Type: .bed Analysis File Name: UW.Fetal_Intestine_Small.Digital_Genomic_Footprinting.H-23769.DGF.DS17317.bed DATA_ANALYSIS_LEVEL: 1 EXPERIMENT_TYPE: Digital Genomic Footprinting GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: Pash SOFTWARE_VERSION: 3.0 MAXIMUM_ALIGNMENT_LENGTH: Read length MISMATCHES_ALLOWED: 10% of read length ALIGNMENTS_ALLOWED: 1 TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration. TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None ALIGNMENT_POSTPROCESSING: None RELEASE_NUMBER: Human Epigenome Atlas 9 NUMBER_OF_MAPPED_READS: 357,862,675 NUMBER_OF_DIGITAL_GENOMIC_FOOTPRINTING_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 11 FINDPEAKS_SCORE: 0.4001 FINDPEAKS_PERCENTILE: 18 HOTSPOT_SCORE: 0.3777 HOTSPOT_PERCENTILE: 18 IROC_SCORE: 0.9921 IROC_PERCENTILE: 45 POISSON_SCORE: 0.4441 POISSON_PERCENTILE: 27 MAXIMUM_REPLICATE_CORRELATION: NA |
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