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Raw Signal Density Graphs of H1 BMP4 Derived Trophoblast Cultured Cells H3K79me1 ChIP-Seq Data
Illumina H3K79me1 ChIP-Seq read mappings from the H1 BMP4 Derived Trophoblast Cultured Cells, Library AY229, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/7/9: ANALYSIS XML file 'ucsd.chip-seq.level.2.xml' uploaded
alias: renlab.H3K79me1.BMP4T.01.01.hg19.level.2.release.8
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K79me1.AY229.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 8 BROWSER_TRACK_NAME: HBDT H3K79me1 29 BROWSER_TRACK_DESCRIPTION: UCSD H1 BMP4 Derived Trophoblast Cultured Cells Histone H3K79me1 Library AY229 EA Release 8 NUMBER_OF_MAPPED_READS: 25,133,086 NUMBER_OF_H3K79me1_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 2 FINDPEAKS_SCORE: 0.3369 FINDPEAKS_PERCENTILE: 100 HOTSPOT_SCORE: 0.4065 HOTSPOT_PERCENTILE: 100 IROC_SCORE: 0.9861 IROC_PERCENTILE: 100 POISSON_SCORE: 0.5211 POISSON_PERCENTILE: 100 MAXIMUM_REPLICATE_CORRELATION: 0.96 |
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