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Raw Signal Density Graphs of Skeletal Muscle H3K27ac ChIP-Seq Data
Illumina H3K27ac ChIP-Seq read mappings from Skeletal Muscle, Donor 62, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/7/5: ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 1766-DNA_Lib 1766.hg19.level.2.release.6
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: BI.Skeletal_Muscle.H3K27ac.62.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 8 BROWSER_TRACK_NAME: SM H3K27ac 62 66 BROWSER_TRACK_DESCRIPTION: BI Skeletal Muscle Histone H3K27ac Donor 62 Library DNA_Lib 1766 EA Release 8 NUMBER_OF_MAPPED_READS: 18,950,385 NUMBER_OF_H3K27ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 21 FINDPEAKS_SCORE: 0.5266 FINDPEAKS_PERCENTILE: 76 HOTSPOT_SCORE: 0.5417 HOTSPOT_PERCENTILE: 76 IROC_SCORE: 0.9968 IROC_PERCENTILE: 43 POISSON_SCORE: 0.6003 POISSON_PERCENTILE: 81 MAXIMUM_REPLICATE_CORRELATION: 0.0 |
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