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Mapping of Penis Foreskin Fibroblast Primary Cells Digital Genomic Footprinting Data
Illumina reads produced by Digital Genomic Footprinting on Penis Foreskin Fibroblast Primary Cells, Donor skin01, Library DGF.DS18224 were mapped to the human genome using Pash.
Project News:
2012/6/26: ANALYSIS XML file 'uw.digitalGenomicFootprinting.level.1.xml' uploaded
alias: DGF.DS18224.hg19.level.1.release.8
Analysis Center: EDACC Analysis File Type: .bed Analysis File Name: UW.Penis_Foreskin_Fibroblast_Primary_Cells.Digital_Genomic_Footprinting.skin01.DGF.DS18224.bed DATA_ANALYSIS_LEVEL: 1 EXPERIMENT_TYPE: Digital Genomic Footprinting GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: Pash SOFTWARE_VERSION: 3.0 MAXIMUM_ALIGNMENT_LENGTH: Read length MISMATCHES_ALLOWED: 10% of read length ALIGNMENTS_ALLOWED: 1 TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration. TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None ALIGNMENT_POSTPROCESSING: None RELEASE_NUMBER: Human Epigenome Atlas 8 NUMBER_OF_MAPPED_READS: 433,775,987 NUMBER_OF_DIGITAL_GENOMIC_FOOTPRINTING_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 5 FINDPEAKS_SCORE: 0.6769 FINDPEAKS_PERCENTILE: 100 HOTSPOT_SCORE: 0.6776 HOTSPOT_PERCENTILE: 100 IROC_SCORE: 0.9983 IROC_PERCENTILE: 40 POISSON_SCORE: 0.7024 POISSON_PERCENTILE: 100 MAXIMUM_REPLICATE_CORRELATION: NA |
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