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Raw Signal Density Graphs of Fibroblasts Fetal Skin Quadriceps Right Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fibroblasts Fetal Skin Quadriceps Right, Donor H-24259, Library DS19943 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/5/30:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS19943.hg19.level.2.release.7
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fibroblasts_Fetal_Skin_Quadriceps_Right.ChromatinAccessibility.H-24259.DS19943.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 7
BROWSER_TRACK_NAME: FFSQR DNase 59 43
BROWSER_TRACK_DESCRIPTION: UW Fibroblasts Fetal Skin Quadriceps Right DNase Hypersensitivity Donor H-24259 Library DS19943 EA Release 7
NUMBER_OF_MAPPED_READS: 35,321,851
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 58
FINDPEAKS_SCORE: 0.4814
FINDPEAKS_PERCENTILE: 66
HOTSPOT_SCORE: 0.5499
HOTSPOT_PERCENTILE: 72
IROC_SCORE: 0.9971
IROC_PERCENTILE: 84
POISSON_SCORE: 0.5464
POISSON_PERCENTILE: 71
MAXIMUM_REPLICATE_CORRELATION: 1.0
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fibroblasts_Fetal_Skin_Quadriceps_Right.ChromatinAccessibility.H-24259.DS19943.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 7
BROWSER_TRACK_NAME: FFSQR DNase 59 43
BROWSER_TRACK_DESCRIPTION: UW Fibroblasts Fetal Skin Quadriceps Right DNase Hypersensitivity Donor H-24259 Library DS19943 EA Release 7
NUMBER_OF_MAPPED_READS: 35,321,851
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 58
FINDPEAKS_SCORE: 0.4814
FINDPEAKS_PERCENTILE: 66
HOTSPOT_SCORE: 0.5499
HOTSPOT_PERCENTILE: 72
IROC_SCORE: 0.9971
IROC_PERCENTILE: 84
POISSON_SCORE: 0.5464
POISSON_PERCENTILE: 71
MAXIMUM_REPLICATE_CORRELATION: 1.0
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