|
|
| Home | Browser | Tools | Log Out |
Help
|
Genboree Home |
Raw Signal Density Graphs of Fetal Renal Cortex Right Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Renal Cortex Right, Donor H-24169, Library DS18928 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/5/3:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS18928.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Cortex_Right.ChromatinAccessibility.H-24169.DS18928.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FRCR DNase 69 28
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Cortex Right DNase Hypersensitivity Donor H-24169 Library DS18928 EA Release 6
NUMBER_OF_MAPPED_READS: 28,371,473
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.3548
FINDPEAKS_PERCENTILE: 43
HOTSPOT_SCORE: 0.3477
HOTSPOT_PERCENTILE: 44
IROC_SCORE: 0.9917
IROC_PERCENTILE: 32
POISSON_SCORE: 0.4292
POISSON_PERCENTILE: 43
MAXIMUM_REPLICATE_CORRELATION: 0.97
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Cortex_Right.ChromatinAccessibility.H-24169.DS18928.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FRCR DNase 69 28
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Cortex Right DNase Hypersensitivity Donor H-24169 Library DS18928 EA Release 6
NUMBER_OF_MAPPED_READS: 28,371,473
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.3548
FINDPEAKS_PERCENTILE: 43
HOTSPOT_SCORE: 0.3477
HOTSPOT_PERCENTILE: 44
IROC_SCORE: 0.9917
IROC_PERCENTILE: 32
POISSON_SCORE: 0.4292
POISSON_PERCENTILE: 43
MAXIMUM_REPLICATE_CORRELATION: 0.97
|
© 2001-2024 Baylor College of Medicine
Bioinformatics Research Laboratory (400D Jewish Wing, MS:BCM225, 1 Baylor Plaza, Houston, TX 77030) |