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Raw Signal Density Graphs of Fetal Renal Pelvis Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Renal Pelvis, Donor H-24078, Library DS18431 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/5/3:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS18431.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Pelvis.ChromatinAccessibility.H-24078.DS18431.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FRP DNase 78 31
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Pelvis DNase Hypersensitivity Donor H-24078 Library DS18431 EA Release 6
NUMBER_OF_MAPPED_READS: 31,273,429
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.2728
FINDPEAKS_PERCENTILE: 11
HOTSPOT_SCORE: 0.277
HOTSPOT_PERCENTILE: 11
IROC_SCORE: 0.9871
IROC_PERCENTILE: 6
POISSON_SCORE: 0.3688
POISSON_PERCENTILE: 17
MAXIMUM_REPLICATE_CORRELATION: 0.96
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Pelvis.ChromatinAccessibility.H-24078.DS18431.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FRP DNase 78 31
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Pelvis DNase Hypersensitivity Donor H-24078 Library DS18431 EA Release 6
NUMBER_OF_MAPPED_READS: 31,273,429
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.2728
FINDPEAKS_PERCENTILE: 11
HOTSPOT_SCORE: 0.277
HOTSPOT_PERCENTILE: 11
IROC_SCORE: 0.9871
IROC_PERCENTILE: 6
POISSON_SCORE: 0.3688
POISSON_PERCENTILE: 17
MAXIMUM_REPLICATE_CORRELATION: 0.96
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