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Raw Signal Density Graphs of Fetal Kidney Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Kidney, Donor H-23663, Library DS16837 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/5/3:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS16837.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Kidney.ChromatinAccessibility.H-23663.DS16837.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FK DNase 63 37
BROWSER_TRACK_DESCRIPTION: UW Fetal Kidney DNase Hypersensitivity Donor H-23663 Library DS16837 EA Release 6
NUMBER_OF_MAPPED_READS: 30,761,487
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.348
FINDPEAKS_PERCENTILE: 40
HOTSPOT_SCORE: 0.3436
HOTSPOT_PERCENTILE: 40
IROC_SCORE: 0.9892
IROC_PERCENTILE: 16
POISSON_SCORE: 0.4258
POISSON_PERCENTILE: 41
MAXIMUM_REPLICATE_CORRELATION: 0.97
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Kidney.ChromatinAccessibility.H-23663.DS16837.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FK DNase 63 37
BROWSER_TRACK_DESCRIPTION: UW Fetal Kidney DNase Hypersensitivity Donor H-23663 Library DS16837 EA Release 6
NUMBER_OF_MAPPED_READS: 30,761,487
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.348
FINDPEAKS_PERCENTILE: 40
HOTSPOT_SCORE: 0.3436
HOTSPOT_PERCENTILE: 40
IROC_SCORE: 0.9892
IROC_PERCENTILE: 16
POISSON_SCORE: 0.4258
POISSON_PERCENTILE: 41
MAXIMUM_REPLICATE_CORRELATION: 0.97
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