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Raw Signal Density Graphs of Penis Foreskin Fibroblast Primary Cells Histone H3K36me3 ChIP-Seq Data
Illumina Histone H3K36me3 ChIP-Seq read mappings from Penis Foreskin Fibroblast Primary Cells, Donor skin02 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/4/12: ANALYSIS XML file 'ucsf-ubc.chip-seq.level.2.xml' uploaded
alias: A08399-1.hg19.level.2.release.6
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K36me3.skin02.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 6 BROWSER_TRACK_NAME: PFF H3K36me3 02 99 BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Penis Foreskin Fibroblast Primary Cells Histone H3K36me3 Donor skin02 Library A08399 EA Release 6 NUMBER_OF_MAPPED_READS: 67,296,751 NUMBER_OF_H3K36me3_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 13 FINDPEAKS_SCORE: 0.1279 FINDPEAKS_PERCENTILE: 69 HOTSPOT_SCORE: 0.1703 HOTSPOT_PERCENTILE: 38 IROC_SCORE: 0.9541 IROC_PERCENTILE: 85 POISSON_SCORE: 0.4149 POISSON_PERCENTILE: 77 MAXIMUM_REPLICATE_CORRELATION: 0.98 |
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