|
|
| Home | Browser | Tools | Log Out |
Help
|
Genboree Home |
Raw Signal Density Graphs of H9 Cell Line Histone H2BK15ac ChIP-Seq Data
Illumina Histone H2BK15ac ChIP-Seq read mappings from the H9 Cell Line, Library SK376, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/4/12:
ANALYSIS XML file 'ucsd.chip-seq.level.2.xml' uploaded
alias: renlab.H2BK15ac.hESC.H9.02.01.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSD.H9.H2BK15ac.SK376.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: H9 H2BK15ac 76
BROWSER_TRACK_DESCRIPTION: UCSD H9 Cell Line Histone H2BK15ac Library SK376 EA Release 6
NUMBER_OF_MAPPED_READS: 14,904,074
NUMBER_OF_H2BK15ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 2
FINDPEAKS_SCORE: 0.0107
FINDPEAKS_PERCENTILE: 100
HOTSPOT_SCORE: 0.1406
HOTSPOT_PERCENTILE: 100
IROC_SCORE: 0.6418
IROC_PERCENTILE: 50
POISSON_SCORE: 0.2666
POISSON_PERCENTILE: 100
MAXIMUM_REPLICATE_CORRELATION: 0.88
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSD.H9.H2BK15ac.SK376.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: H9 H2BK15ac 76
BROWSER_TRACK_DESCRIPTION: UCSD H9 Cell Line Histone H2BK15ac Library SK376 EA Release 6
NUMBER_OF_MAPPED_READS: 14,904,074
NUMBER_OF_H2BK15ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 2
FINDPEAKS_SCORE: 0.0107
FINDPEAKS_PERCENTILE: 100
HOTSPOT_SCORE: 0.1406
HOTSPOT_PERCENTILE: 100
IROC_SCORE: 0.6418
IROC_PERCENTILE: 50
POISSON_SCORE: 0.2666
POISSON_PERCENTILE: 100
MAXIMUM_REPLICATE_CORRELATION: 0.88
|
© 2001-2024 Baylor College of Medicine
Bioinformatics Research Laboratory (400D Jewish Wing, MS:BCM225, 1 Baylor Plaza, Houston, TX 77030) |