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Raw Signal Density Graphs of Fetal Brain MeDIP-Seq Data
Illumina MeDIP-Seq read mappings from Fetal Brain, Donor H-23284 were processed into density graphs of raw signal representing the aligned read density.


Project News:
2012/3/28:
ANALYSIS XML file 'ucsf-ubc.medip.level.2.xml' uploaded



alias: A02299-1.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Fetal_Brain.MeDIP-Seq.H-23284.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: MeDIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FB MeDIP 84 99
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Fetal Brain MeDIP-Seq Donor H-23284 Library A02299 EA Release 6
NUMBER_OF_MAPPED_READS: 68,648,894
NUMBER_OF_MEDIP-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 2
FINDPEAKS_SCORE: 0.0805
FINDPEAKS_PERCENTILE: 50
HOTSPOT_SCORE: 0.249
HOTSPOT_PERCENTILE: 50
IROC_SCORE: 0.886
IROC_PERCENTILE: 50
POISSON_SCORE: 0.4054
POISSON_PERCENTILE: 50
MAXIMUM_REPLICATE_CORRELATION: 0.98

 

 


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