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Raw Signal Density Graphs of CD15 Primary Cells Histone H3K4me1 ChIP-Seq Data
Illumina Histone H3K4me1 ChIP-Seq read mappings from CD15 Primary Cells, Donor 23.0, were processed into density graphs of raw signal representing the aligned read density.


Project News:
2011/12/19:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded



alias: Lib EpiLabSPL Row 1796.hg19.level.2.release.5
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD15_Primary_Cells.H3K4me1.23.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 5
BROWSER_TRACK_NAME: CD15 H3K4me1 23.0 96
BROWSER_TRACK_DESCRIPTION: BI CD15 Primary Cells Histone H3K4me1 Donor 23.0 Library Lib EpiLabSPL Row 1796 EA Release 5
NUMBER_OF_MAPPED_READS: 30,199,571
NUMBER_OF_H3K4me1_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 54
FINDPEAKS_SCORE: 0.5325
FINDPEAKS_PERCENTILE: 94
HOTSPOT_SCORE: 0.5141
HOTSPOT_PERCENTILE: 91
IROC_SCORE: 0.9999
IROC_PERCENTILE: 100
POISSON_SCORE: 0.5761
POISSON_PERCENTILE: 87
MAXIMUM_REPLICATE_CORRELATION: NA

 

 


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