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BI Human Reference Epigenome Mapping Project
Human Chromatin IP REMC Sequencing on Illumina
Project News:
2009/6/10: EXPERIMENT XML file 'BI.experiment.30CMAAAXX.2.H1.H3K27me3.xml' uploaded
alias: 30CMAAAXX081006-2-S
expected_number_runs: 1 expected_number_spots: 10000000 expected_number_reads: 10000000 center_name: BI STUDY_REF: G1828 SAMPLE_DESCRIPTOR: 27277.0 LIBRARY LIBRARY_NAME: Solexa-8039 LIBRARY_STRATEGY: ChIP-Seq LIBRARY_SOURCE: GENOMIC LIBRARY_SELECTION: ChIP LIBRARY_LAYOUT: SINGLE LIBRARY_CONSTRUCTION_PROTOCOL: Single read - Illumina SPOT SPOT_DECODE_METHOD: 1 PLATFORM ILLUMINA INSTRUMENT_MODEL: Illumina Genome Analyzer II CYCLE_SEQUENCE: CYCLE_COUNT: 50 BASE CALLS SEQUENCE_SPACE: Base Space BASE_CALLER: Solexa primary analysis QUALITY SCORES Quality Type: other QUALITY_SCORER: Solexa primary analysis NUMBER_OF_LEVELS: 80 MULTIPLIER: 1.0 ATTRIBUTES EXPERIMENT_TYPE: Histone H3K27me3 EXTRACTION_PROTOCOL: SDS lysis EXTRACTION_PROTOCOL_TYPE_OF_SONICATOR: Bioruptor EXTRACTION_PROTOCOL_SONICATION_CYCLES: 1 CHIP_PROTOCOL: standard CHIP_PROTOCOL_CHROMATIN_AMOUNT: standard CHIP_PROTOCOL_BEAD_TYPE: standard CHIP_PROTOCOL_BEAD_AMOUNT: standard CHIP_PROTOCOL_ANTIBODY_AMOUNT: standard CHIP_ANTIBODY: H3K27Me3 CHIP_ANTIBODY_PROVIDER: Upstate CHIP_ANTIBODY_CATALOG: 07-449 CHIP_ANTIBODY_LOT: DAM1387952 |
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