expected_number_runs: 1
center_name: BCCAGSC
alias: A08748-1

STUDY_REF: UCSF_UBC_HREMP
SAMPLE_DESCRIPTOR: SRS265437

LIBRARY
LIBRARY_NAME: A08748
LIBRARY_STRATEGY: ChIP-Seq
LIBRARY_SOURCE: GENOMIC
LIBRARY_SELECTION: RANDOM
LIBRARY_LAYOUT: SINGLE
POOLING_STRATEGY: none
LIBRARY_CONSTRUCTION_PROTOCOL: BCCAGSC ChIP Standard Operating Procedure

SPOT
NUMBER_OF_READS_PER_SPOT: 1
READ_INDEX: 0
READ_CLASS: Application Read
READ_TYPE: Forward
BASE_COORD: 1
READ_INDEX: 1
READ_CLASS: Technical Read
READ_TYPE: BarCode
BASE_COORD: 77

PLATFORM
ILLUMINA
INSTRUMENT_MODEL: Illumina HiSeq 2000
SEQUENCE_LENGTH: 83

BASE CALLS
Illumina RTA 1.12.4.2

QUALITY SCORES
Illumina RTA 1.12.4.2

ATTRIBUTES
EXPERIMENT_TYPE: ChIP-Seq Input
EXTRACTION_PROTOCOL: BCCAGSC ChIP Standard Operating Procedure
EXTRACTION_PROTOCOL_TYPE_OF_SONICATOR: Fisher 550 Sonic Dismembrator
EXTRACTION_PROTOCOL_SONICATION_CYCLES: 10min
CHIP_PROTOCOL: Input
CHIP_PROTOCOL_CHROMATIN_AMOUNT: NA
SIZE_FRACTION: 130-372bp