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Sequence Tag Counts of Fetal Brain smRNA-Seq Data
Illumina reads produced by smRNA-Seq on Fetal Brain, Donor HuFNSC01 had the sequence trimmed for adapters and the count of unique sequences calculated.
Project News:
2011/8/30:
ANALYSIS XML file 'ucsf-ubc.smrna-seq.level.2.tags.xml' uploaded
alias: M01581-1.hg19.level.2.tag
Analysis Center: EDACC
Analysis File Type: .tab
Analysis File Name: UCSF-UBC.Fetal_Brain.smRNA-Seq.HuFNSC01.tag.tab
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: smRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
RELEASE_NUMBER: Human Epigenome Atlas 4
NUMBER_OF_MAPPED_READS: 7,156,714
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA: 89.53
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA_PERCENTILE: 80
MAXIMUM_REPLICATE_CORRELATION: 0.996
Analysis Center: EDACC
Analysis File Type: .tab
Analysis File Name: UCSF-UBC.Fetal_Brain.smRNA-Seq.HuFNSC01.tag.tab
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: smRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
RELEASE_NUMBER: Human Epigenome Atlas 4
NUMBER_OF_MAPPED_READS: 7,156,714
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA: 89.53
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA_PERCENTILE: 80
MAXIMUM_REPLICATE_CORRELATION: 0.996
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