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Sequence Tag Counts of Peripheral Blood Mononuclear Primary Cells smRNA-Seq Data
Illumina reads produced by smRNA-Seq on Peripheral Blood Mononuclear Primary Cells, Donor TC014 had the sequence trimmed for adapters and the count of unique sequences calculated.
Project News:
2011/8/30:
ANALYSIS XML file 'ucsf-ubc.smrna-seq.level.2.tags.xml' uploaded
alias: M00734-1.hg19.level.2.tag
Analysis Center: EDACC
Analysis File Type: .tab
Analysis File Name: UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.smRNA-Seq.TC014.tag.tab
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: smRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
RELEASE_NUMBER: Human Epigenome Atlas 4
NUMBER_OF_MAPPED_READS: 1,330,677
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA: 49.06
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA_PERCENTILE: 13
MAXIMUM_REPLICATE_CORRELATION: NA
Analysis Center: EDACC
Analysis File Type: .tab
Analysis File Name: UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.smRNA-Seq.TC014.tag.tab
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: smRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
RELEASE_NUMBER: Human Epigenome Atlas 4
NUMBER_OF_MAPPED_READS: 1,330,677
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA: 49.06
PERCENT_READS_MAPPING_TO_miRBase_v16_miRNA_PERCENTILE: 13
MAXIMUM_REPLICATE_CORRELATION: NA
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