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Raw Signal Density Graphs of H1-BMP4 Cell Line mRNA-Seq Data
SOLiD mRNA-Seq read mappings from the H1-BMP4 Cell Line, Library mRNA-Seq_h1+bmp4_r2 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/8/9: ANALYSIS XML file 'ucsd.mrna-seq.level.2.xml' uploaded
alias: mRNA-Seq_h1+bmp4_r2.hg19.level.2.release.4
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSD.H1-BMP4.mRNA-Seq.mRNA-Seq_h1+bmp4_r2.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: mRNA-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 0bp GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 4 BROWSER_TRACK_NAME: H1BMP4 mRNA r2 BROWSER_TRACK_DESCRIPTION: UCSD H1-BMP4 Cell Line mRNA-Seq Library mRNA-Seq_h1+bmp4_r2 EA Release 4 NUMBER_OF_MAPPED_READS: 14,984,957 NUMBER_OF_MRNA-SEQ_EXPERIMENTS_SCORED: 8 PERCENT_READS_MAPPING_TO_UCSC_GENES: 93.34 PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 88 MAXIMUM_REPLICATE_CORRELATION: 0.72 |
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