alias: mRNA-Seq_ff_ips_6_9_r1.hg19.level.1.release.4
Analysis Center: EDACC
Analysis File Type: .bed
Analysis File Name: UCSD.iPS_DF_6.9.mRNA-Seq.mRNA-Seq_ff_ips_6_9_r1.bed
DATA_ANALYSIS_LEVEL: 1
EXPERIMENT_TYPE: mRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: Pash
SOFTWARE_VERSION: 3.0
MAXIMUM_ALIGNMENT_LENGTH: Read length
MISMATCHES_ALLOWED: 10% of read length
ALIGNMENTS_ALLOWED: 1
TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration.
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None
ALIGNMENT_POSTPROCESSING: None
RELEASE_NUMBER: Human Epigenome Atlas 4
NUMBER_OF_MAPPED_READS: 15,319,378
NUMBER_OF_MRNA-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 8
PERCENT_READS_MAPPING_TO_UCSC_GENES: 89.84
PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 38
MAXIMUM_REPLICATE_CORRELATION: NA