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Raw Signal Density Graphs of Fetal Kidney ChIP-Seq Input Data
Illumina ChIP-Seq Input read mappings from Fetal Kidney, Donor UW H23435 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/7/27: ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 464.hg19.level.2.release.4
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: BI.Fetal_Kidney.Input.UW_H23435.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 4 BROWSER_TRACK_NAME: FK Input 35 64 BROWSER_TRACK_DESCRIPTION: BI Fetal Kidney ChIP-Seq Input Donor UW H23435 Library DNA_Lib 464 EA Release 4 NUMBER_OF_MAPPED_READS: 18,518,935 NUMBER_OF_Input_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 14 FINDPEAKS_SCORE: 0.006 FINDPEAKS_PERCENTILE: 50 HOTSPOT_SCORE: 0.0625 HOTSPOT_PERCENTILE: 83 IROC_SCORE: 0.9551 IROC_PERCENTILE: 33 POISSON_SCORE: 0.0929 POISSON_PERCENTILE: 83 MAXIMUM_REPLICATE_CORRELATION: NA |
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