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Raw Signal Density Graphs of Fetal Lung Histone H3K9ac ChIP-Seq Data
Illumina Histone H3K9ac ChIP-Seq read mappings from Fetal Lung, Donor UW H22772 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/7/27:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 393.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Fetal_Lung.H3K9ac.UW_H22772.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FL H3K9ac 72 93
BROWSER_TRACK_DESCRIPTION: BI Fetal Lung Histone H3K9ac Donor UW H22772 Library DNA_Lib 393 EA Release 4
NUMBER_OF_MAPPED_READS: 17,321,198
NUMBER_OF_H3K9ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 3
FINDPEAKS_SCORE: 0.1404
FINDPEAKS_PERCENTILE: 67
HOTSPOT_SCORE: 0.2297
HOTSPOT_PERCENTILE: 33
IROC_SCORE: 0.9834
IROC_PERCENTILE: 67
POISSON_SCORE: 0.2941
POISSON_PERCENTILE: 33
MAXIMUM_REPLICATE_CORRELATION: 0.89
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Fetal_Lung.H3K9ac.UW_H22772.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FL H3K9ac 72 93
BROWSER_TRACK_DESCRIPTION: BI Fetal Lung Histone H3K9ac Donor UW H22772 Library DNA_Lib 393 EA Release 4
NUMBER_OF_MAPPED_READS: 17,321,198
NUMBER_OF_H3K9ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 3
FINDPEAKS_SCORE: 0.1404
FINDPEAKS_PERCENTILE: 67
HOTSPOT_SCORE: 0.2297
HOTSPOT_PERCENTILE: 33
IROC_SCORE: 0.9834
IROC_PERCENTILE: 67
POISSON_SCORE: 0.2941
POISSON_PERCENTILE: 33
MAXIMUM_REPLICATE_CORRELATION: 0.89
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